RE: RocksDB tuning

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Checksums are definitely a part of the problem, but I suspect the smaller part of the problem. This particular use-case (random 4K overwrites without the WAL stuff) is the worst-case from an encoding perspective and highlights the inefficiency in the current code.

As has been discussed earlier, a specialized encode/decode implementation for these data structures is clearly called for.

IMO, you'll be able to cut the size of this by AT LEAST a factor of 3 or 4 without a lot of effort. The price will be somewhat increase CPU cost for the serialize/deserialize operation.

If you think of this as an application-specific data compression problem, here is a short list of potential compression opportunities.

(1) Encoded sizes and offsets are 8-byte byte values, converting these too block values will drop 9 or 12 bits from each value. Also, the ranges for these values is usually only 2^22 -- often much less. Meaning that there's 3-5 bytes of zeros at the top of each word that can be dropped.
(2) Encoded device addresses are often less than 2^32, meaning there's 3-4 bytes of zeros at the top of each word that can be dropped.
 (3) Encoded offsets and sizes are often exactly "1" block, clever choices of formatting can eliminate these entirely.

IMO, an optimized encoded form of the extent table will be around 1/4 of the current encoding (for this use-case) and will likely result in an Onode that's only 1/3 of the size that Somnath is seeing. 

Allen Samuels
SanDisk |a Western Digital brand
2880 Junction Avenue, Milpitas, CA 95134
T: +1 408 801 7030| M: +1 408 780 6416
allen.samuels@xxxxxxxxxxx


> -----Original Message-----
> From: Sage Weil [mailto:sweil@xxxxxxxxxx]
> Sent: Friday, June 10, 2016 2:35 AM
> To: Somnath Roy <Somnath.Roy@xxxxxxxxxxx>
> Cc: Mark Nelson <mnelson@xxxxxxxxxx>; Allen Samuels
> <Allen.Samuels@xxxxxxxxxxx>; Manavalan Krishnan
> <Manavalan.Krishnan@xxxxxxxxxxx>; Ceph Development <ceph-
> devel@xxxxxxxxxxxxxxx>
> Subject: RE: RocksDB tuning
> 
> On Fri, 10 Jun 2016, Somnath Roy wrote:
> > Sage/Mark,
> > I debugged the code and it seems there is no WAL write going on and
> working as expected. But, in the process, I found that onode size it is writing
> to my environment ~7K !! See this debug print.
> >
> > 2016-06-09 15:49:24.710149 7f7732fe3700 20
> bluestore(/var/lib/ceph/osd/ceph-0)   onode
> #1:7d3c6423:::rbd_data.10186b8b4567.0000000000070cd4:head# is 7518
> >
> > This explains why so much data going to rocksdb I guess. Once
> > compaction kicks in iops I am getting is *30 times* slower.
> >
> > I have 15 osds on 8TB drives and I have created 4TB rbd image
> > preconditioned with 1M. I was running 4K RW test.
> 
> The onode is big because of the csum metdata.  Try setting 'bluestore csum
> type = none' and see if that is the entire reason or if something else is going
> on.
> 
> We may need to reconsider the way this is stored.
> 
> s
> 
> 
> 
> 
> >
> > Thanks & Regards
> > Somnath
> >
> > -----Original Message-----
> > From: ceph-devel-owner@xxxxxxxxxxxxxxx
> > [mailto:ceph-devel-owner@xxxxxxxxxxxxxxx] On Behalf Of Somnath Roy
> > Sent: Thursday, June 09, 2016 8:23 AM
> > To: Mark Nelson; Allen Samuels; Manavalan Krishnan; Ceph Development
> > Subject: RE: RocksDB tuning
> >
> > Mark,
> > As we discussed, it seems there is ~5X write amp on the system with 4K
> RW. Considering the amount of data going into rocksdb (and thus kicking of
> compaction so fast and degrading performance drastically) , it seems it is still
> writing WAL (?)..I used the following rocksdb option for faster background
> compaction as well hoping it can keep up with upcoming writes and writes
> won't be stalling. But, eventually, after a min or so, it is stalling io..
> >
> > bluestore_rocksdb_options =
> "compression=kNoCompression,max_write_buffer_number=16,min_write_
> buffer_number_to_merge=3,recycle_log_file_num=16,compaction_style=k
> CompactionStyleLevel,write_buffer_size=67108864,target_file_size_base=6
> 7108864,max_background_compactions=31,level0_file_num_compaction_tri
> gger=8,level0_slowdown_writes_trigger=32,level0_stop_writes_trigger=64,
> num_levels=4,max_bytes_for_level_base=536870912,max_bytes_for_level
> _multiplier=8,compaction_threads=32,flusher_threads=8"
> >
> > I will try to debug what is going on there..
> >
> > Thanks & Regards
> > Somnath
> >
> > -----Original Message-----
> > From: ceph-devel-owner@xxxxxxxxxxxxxxx
> > [mailto:ceph-devel-owner@xxxxxxxxxxxxxxx] On Behalf Of Mark Nelson
> > Sent: Thursday, June 09, 2016 6:46 AM
> > To: Allen Samuels; Manavalan Krishnan; Ceph Development
> > Subject: Re: RocksDB tuning
> >
> > On 06/09/2016 08:37 AM, Mark Nelson wrote:
> > > Hi Allen,
> > >
> > > On a somewhat related note, I wanted to mention that I had forgotten
> > > that chhabaremesh's min_alloc_size commit for different media types
> > > was committed into master:
> > >
> > >
> https://github.com/ceph/ceph/commit/8185f2d356911274ca679614611dc335
> > > e3
> > > efd187
> > >
> > >
> > > IE those tests appear to already have been using a 4K min alloc size
> > > due to non-rotational NVMe media.  I went back and verified that
> > > explicitly changing the min_alloc size (in fact all of them to be
> > > sure) to 4k does not change the behavior from graphs I showed
> > > yesterday.  The rocksdb compaction stalls due to excessive reads
> > > appear (at least on the
> > > surface) to be due to metadata traffic during heavy small random writes.
> >
> > Sorry, this was worded poorly.  Traffic due to compaction of metadata (ie
> not leaked WAL data) during small random writes.
> >
> > Mark
> >
> > >
> > > Mark
> > >
> > > On 06/08/2016 06:52 PM, Allen Samuels wrote:
> > >> Let's make a patch that creates actual Ceph parameters for these
> > >> things so that we don't have to edit the source code in the future.
> > >>
> > >>
> > >> Allen Samuels
> > >> SanDisk |a Western Digital brand
> > >> 2880 Junction Avenue, San Jose, CA 95134
> > >> T: +1 408 801 7030| M: +1 408 780 6416 allen.samuels@xxxxxxxxxxx
> > >>
> > >>
> > >>> -----Original Message-----
> > >>> From: ceph-devel-owner@xxxxxxxxxxxxxxx [mailto:ceph-devel-
> > >>> owner@xxxxxxxxxxxxxxx] On Behalf Of Manavalan Krishnan
> > >>> Sent: Wednesday, June 08, 2016 3:10 PM
> > >>> To: Mark Nelson <mnelson@xxxxxxxxxx>; Ceph Development <ceph-
> > >>> devel@xxxxxxxxxxxxxxx>
> > >>> Subject: RocksDB tuning
> > >>>
> > >>> Hi Mark
> > >>>
> > >>> Here are the tunings that we used to avoid the IOPs choppiness
> > >>> caused by rocksdb compaction.
> > >>>
> > >>> We need to add the following options in src/kv/RocksDBStore.cc
> > >>> before rocksdb::DB::Open in RocksDBStore::do_open
> opt.IncreaseParallelism(16);
> > >>>   opt.OptimizeLevelStyleCompaction(512 * 1024 * 1024);
> > >>>
> > >>>
> > >>>
> > >>> Thanks
> > >>> Mana
> > >>>
> > >>>
> > >>>>
> > >>>
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