Re: mysqld breaks yum, help?

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He installed some software that 
affects threading and it's likely other things (that he didn't notice yet) 
are also affected. It's still weird, though. If you do not overwrite any 
base files you won't hit this problem.

Woah.

Well, here's where I disagree What's non standard in my install other than PHP? Furthermore, uninstalling PHP does nothing?

I submit yum.log for further scrutiny. Note the part where I removed PHP and the problem still persisted.


Oct 03 20:13:12 Installed: nano.i386 1.3.12-1.1
Oct 03 20:28:42 Installed: make.i386 1:3.81-3.el5
Oct 03 20:29:58 Updated: libgcc.i386 4.1.2-42.el5
Oct 03 20:30:04 Updated: glibc-common.i386 2.5-24
Oct 03 20:30:10 Updated: glibc.i686 2.5-24
Oct 03 20:30:10 Installed: glibc-headers.i386 2.5-24
Oct 03 20:30:10 Installed: glibc-devel.i386 2.5-24
Oct 03 20:30:10 Installed: binutils.i386 2.17.50.0.6-6.el5
Oct 03 20:30:10 Installed: cpp.i386 4.1.2-42.el5
Oct 03 20:30:10 Installed: libgomp.i386 4.1.2-42.el5
Oct 03 20:30:11 Installed: gcc.i386 4.1.2-42.el5
Oct 03 20:39:36 Updated: bash.i386 3.2-21.el5
Oct 03 20:39:36 Updated: chkconfig.i386 1.3.30.1-2
Oct 03 20:39:36 Updated: popt.i386 1.10.2-48.el5
Oct 03 20:39:36 Updated: audit-libs.i386 1.6.5-9.el5
Oct 03 20:39:36 Updated: bzip2-libs.i386 1.0.3-4.el5_2
Oct 03 20:39:39 Updated: perl.i386 4:5.8.8-15.el5_2.1
Oct 03 20:39:39 Updated: libacl.i386 2.2.39-3.el5
Oct 03 20:39:40 Updated: libxml2.i386 2.6.26-2.1.2.6
Oct 03 20:39:40 Updated: freetype.i386 2.2.1-20.el5_2
Oct 03 20:39:40 Updated: libpng.i386 2:1.2.10-7.1.el5_0.1
Oct 03 20:39:40 Updated: libstdc++.i386 4.1.2-42.el5
Oct 03 20:39:40 Updated: libtiff.i386 3.8.2-7.el5_2.2
Oct 03 20:39:40 Updated: pcre.i386 6.6-2.el5_1.7
Oct 03 20:39:40 Updated: procps.i386 3.2.7-9.el5
Oct 03 20:39:40 Installed: nspr.i386 4.7.1-1.el5
Oct 03 20:40:11 Installed: nss.i386 3.12.1.1-1.el5.centos.1
Oct 03 20:40:11 Updated: file.i386 4.17-13
Oct 03 20:40:11 Updated: gnutls.i386 1.4.1-3.el5_1
Oct 03 20:40:11 Updated: cups-libs.i386 1:1.2.4-11.18.el5_2.1
Oct 03 20:40:11 Updated: tcp_wrappers.i386 7.6-40.4.el5
Oct 03 20:40:12 Updated: libX11.i386 1.0.3-9.el5
Oct 03 20:40:12 Updated: diffutils.i386 2.8.1-15.2.3.el5
Oct 03 20:40:12 Updated: iproute.i386 2.6.18-7.el5
Oct 03 20:40:12 Updated: pkgconfig.i386 1:0.21-2.el5
Oct 03 20:40:12 Updated: centos-release-notes.i386 5.2-2
Oct 03 20:40:12 Updated: centos-release.i386 10:5-2.el5.centos
Oct 03 20:40:12 Updated: cracklib-dicts.i386 2.8.9-3.3
Oct 03 20:40:12 Updated: libxslt.i386 1.1.17-2.el5_2.2
Oct 03 20:40:13 Updated: kernel-headers.i386 2.6.18-92.1.13.el5
Oct 03 20:40:13 Installed: keyutils-libs.i386 1.2-1.el5
Oct 03 20:40:13 Updated: bzip2.i386 1.0.3-4.el5_2
Oct 03 20:40:13 Updated: iptables.i386 1.3.5-4.el5
Oct 03 20:40:13 Updated: gzip.i386 1.3.5-10.el5.centos
Oct 03 20:40:13 Updated: telnet.i386 1:0.17-39.el5
Oct 03 20:40:14 Updated: man-pages.noarch 2.39-10.el5
Oct 03 20:40:14 Updated: tzdata.noarch 2008e-1.el5
Oct 03 20:40:14 Updated: traceroute.i386 3:2.0.1-3.el5
Oct 03 20:40:15 Updated: libselinux.i386 1.33.4-5.el5
Oct 03 20:40:15 Updated: coreutils.i386 5.97-14.el5
Oct 03 20:40:18 Updated: python.i386 2.4.3-21.el5
Oct 03 20:40:18 Updated: pam.i386 0.99.6.2-3.27.el5
Oct 03 20:40:18 Updated: shadow-utils.i386 2:4.0.17-13.el5
Oct 03 20:40:18 Updated: newt.i386 0.52.2-10.el5
Oct 03 20:40:18 Updated: device-mapper.i386 1.02.24-1.el5
Oct 03 20:40:18 Updated: e2fsprogs-libs.i386 1.39-15.el5
Oct 03 20:40:19 Updated: openssl.i686 0.9.8b-10.el5
Oct 03 20:40:19 Updated: krb5-libs.i386 1.6.1-25.el5
Oct 03 20:40:19 Updated: openldap.i386 2.3.27-8.el5_2.4
Oct 03 20:40:19 Updated: util-linux.i386 2.13-0.47.el5
Oct 03 20:40:19 Updated: psmisc.i386 22.2-6
Oct 03 20:40:19 Updated: libuser.i386 0.54.7-2.el5.5
Oct 03 20:40:20 Updated: samba-common.i386 3.0.28-1.el5_2.1
Oct 03 20:40:20 Updated: postgresql-libs.i386 8.1.11-1.el5_1.1
Oct 03 20:40:20 Updated: apr-util.i386 1.2.7-7.el5
Oct 03 20:40:20 Updated: bind-libs.i386 30:9.3.4-6.0.2.P1.el5_2
Oct 03 20:40:22 Updated: fontconfig.i386 2.4.1-7.el5
Oct 03 20:40:22 Updated: cracklib.i386 2.8.9-3.3
Oct 03 20:40:22 Updated: usermode.i386 1.88-3.el5.1
Oct 03 20:40:22 Updated: e2fsprogs.i386 1.39-15.el5
Oct 03 20:40:22 Updated: audit-libs-python.i386 1.6.5-9.el5
Oct 03 20:40:22 Updated: libselinux-python.i386 1.33.4-5.el5
Oct 03 20:40:22 Updated: libxml2-python.i386 2.6.26-2.1.2.6
Oct 03 20:40:23 Updated: dbus.i386 1.0.0-7.el5
Oct 03 20:40:23 Updated: module-init-tools.i386 3.3-0.pre3.1.37.el5
Oct 03 20:40:23 Updated: net-tools.i386 1.60-78.el5
Oct 03 20:40:23 Updated: initscripts.i386 8.45.19.1.EL-1.el5.centos
Oct 03 20:40:23 Updated: openssh.i386 4.3p2-26.el5_2.1
Oct 03 20:40:23 Updated: sysklogd.i386 1.4.1-44.el5
Oct 03 20:40:23 Updated: mcstrans.i386 0.2.7-1.el5
Oct 03 20:40:23 Updated: logrotate.i386 3.7.4-8
Oct 03 20:40:26 Updated: samba.i386 3.0.28-1.el5_2.1
Oct 03 20:40:26 Updated: httpd.i386 2.2.3-11.el5_1.centos.3
Oct 03 20:40:26 Updated: gd.i386 2.0.33-9.4.el5_1.1
Oct 03 20:40:26 Installed: yum-metadata-parser.i386 1.1.2-2.el5
Oct 03 20:40:26 Installed: python-iniparse.noarch 0.2.3-4.el5
Oct 03 20:40:26 Updated: httpd-manual.i386 2.2.3-11.el5_1.centos.3
Oct 03 20:40:27 Updated: samba-swat.i386 3.0.28-1.el5_2.1
Oct 03 20:40:27 Updated: vixie-cron.i386 4:4.1-72.el5
Oct 03 20:40:27 Updated: openssh-server.i386 4.3p2-26.el5_2.1
Oct 03 20:40:27 Updated: openssh-clients.i386 4.3p2-26.el5_2.1
Oct 03 20:40:27 Updated: authconfig.i386 5.3.21-3.el5
Oct 03 20:40:28 Updated: samba-client.i386 3.0.28-1.el5_2.1
Oct 03 20:40:28 Updated: sudo.i386 1.6.8p12-12.el5
Oct 03 20:40:28 Updated: fetchmail.i386 6.3.6-1.1.el5
Oct 03 20:40:28 Updated: m2crypto.i386 0.16-6.el5.2
Oct 03 20:40:28 Updated: tcpdump.i386 14:3.9.4-12.el5
Oct 03 20:40:28 Updated: ntsysv.i386 1.3.30.1-2
Oct 03 20:40:28 Updated: tar.i386 2:1.15.1-23.0.1.el5
Oct 03 20:40:28 Updated: rpm.i386 4.4.2-48.el5
Oct 03 20:40:29 Updated: rpm-libs.i386 4.4.2-48.el5
Oct 03 20:40:29 Updated: rpm-python.i386 4.4.2-48.el5
Oct 03 20:40:29 Updated: policycoreutils.i386 1.33.12-14.el5
Oct 03 20:40:29 Updated: bind.i386 30:9.3.4-6.0.2.P1.el5_2
Oct 03 20:40:29 Installed: yum-fastestmirror.noarch 1.1.10-9.el5.centos
Oct 03 20:40:29 Updated: caching-nameserver.i386 30:9.3.4-6.0.2.P1.el5_2
Oct 03 20:40:29 Updated: yum.noarch 3.2.8-9.el5.centos.2.1
Oct 03 20:51:41 Installed: logwatch - 7.3-6.el5.noarch
Oct 03 21:50:16 Installed: aspell - 12:0.60.3-7.1.i386
Oct 03 21:50:16 Installed: gmp - 4.1.4-10.el5.i386
Oct 03 21:50:16 Installed: php-common - 5.2.6-jason.1.i386
Oct 03 21:50:17 Installed: php-cli - 5.2.6-jason.1.i386
Oct 03 21:50:17 Installed: aspell-en - 50:6.0-2.1.i386
Oct 03 21:50:17 Installed: php - 5.2.6-jason.1.i386
Oct 03 21:56:43 Installed: php-mbstring - 5.2.6-jason.1.i386
Oct 03 21:57:59 Installed: php-bcmath - 5.2.6-jason.1.i386
Oct 03 21:59:03 Installed: php-pdo - 5.2.6-jason.1.i386
Oct 03 21:59:25 Installed: php-gd - 5.2.6-jason.1.i386
Oct 03 23:14:53 Installed: perl-DBI - 1.52-1.fc6.i386
Oct 03 23:14:54 Installed: mysql - 5.0.58-jason.2.i386
Oct 03 23:18:19 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 03 23:18:20 Installed: mysql-server - 5.0.58-jason.2.i386
Oct 03 23:26:00 Installed: keyutils-libs-devel - 1.2-1.el5.i386
Oct 03 23:26:00 Installed: libsepol-devel - 1.15.2-1.el5.i386
Oct 03 23:26:00 Installed: libselinux-devel - 1.33.4-5.el5.i386
Oct 03 23:26:01 Installed: e2fsprogs-devel - 1.39-15.el5.i386
Oct 03 23:26:01 Installed: krb5-devel - 1.6.1-25.el5.i386
Oct 03 23:26:01 Installed: zlib-devel - 1.2.3-3.i386
Oct 03 23:26:01 Installed: openssl-devel - 0.9.8b-10.el5.i386
Oct 03 23:26:01 Installed: mysql-devel - 5.0.58-jason.2.i386
Oct 03 23:37:50 Erased: perl-DBD-MySQL
Oct 03 23:37:50 Erased: mysql-server
Oct 03 23:37:50 Erased: mysql
Oct 03 23:37:50 Erased: mysql-devel
Oct 03 23:40:26 Installed: mysql - 5.0.45-7.el5.i386
Oct 03 23:40:26 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 03 23:40:27 Installed: mysql-devel - 5.0.45-7.el5.i386
Oct 03 23:40:27 Installed: mysql-server - 5.0.45-7.el5.i386
Oct 03 23:42:25 Erased: mysql-devel
Oct 03 23:42:25 Erased: perl-DBD-MySQL
Oct 03 23:42:25 Erased: mysql-server
Oct 03 23:42:25 Erased: mysql
Oct 03 23:51:31 Installed: yum-priorities - 1.1.10-9.el5.centos.noarch
Oct 04 00:21:56 Installed: mysql - 5.0.45-7.el5.i386
Oct 04 00:21:57 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 04 00:21:57 Installed: mysql-server - 5.0.45-7.el5.i386
Oct 04 01:57:17 Erased: mysql-server
Oct 04 01:58:13 Erased: perl-DBD-MySQL
Oct 04 01:58:13 Erased: mysql
Oct 04 01:58:50 Installed: mysql - 5.0.45-7.el5.i386
Oct 04 01:58:50 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 04 01:58:50 Installed: mysql-server - 5.0.45-7.el5.i386
Oct 04 02:56:26 Installed: mx - 2.0.6-2.2.2.i386
Oct 04 02:56:26 Installed: MySQL-python - 1.2.1-1.i386
Oct 04 02:57:37 Erased: MySQL-python
Oct 04 02:57:37 Erased: mx
Oct 04 03:12:36 Installed: php-mysql - 5.2.6-jason.1.i386
Oct 04 03:14:37 Installed: php-pgsql - 5.2.6-jason.1.i386
Oct 05 00:05:50 Installed: mx - 2.0.6-2.2.2.i386
Oct 05 00:05:50 Installed: MySQL-python - 1.2.1-1.i386
Oct 05 00:49:04 Installed: nmap - 2:4.11-1.1.i386
Oct 05 01:08:37 Erased: php-pdo
Oct 05 01:08:37 Erased: php-mbstring
Oct 05 01:08:37 Erased: php-mysql
Oct 05 01:08:37 Erased: php-pgsql
Oct 05 01:08:37 Erased: php-bcmath
Oct 05 01:08:37 Erased: php-cli
Oct 05 01:08:37 Erased: php-common
Oct 05 01:08:37 Erased: php-gd
Oct 05 01:08:37 Erased: php
Oct 05 01:12:56 Installed: php-common - 5.2.6-2.el5s2.i386
Oct 05 01:12:56 Installed: php-pdo - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Updated: postgresql-libs - 8.2.9-1.el5s2.i386
Oct 05 01:12:58 Installed: php-cli - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: postgresqlclient81 - 8.1.11-1.el5s2.i386
Oct 05 01:12:58 Installed: php-mysql - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-gd - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-mbstring - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-bcmath - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-pgsql - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php - 5.2.6-2.el5s2.i386

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