Re: incomplete boot after Fc26-27 upgrade - quick update

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An update.

After several more attempted reboots changing the
command line parameters failed, I logged in and
found that several commands, notably "systemctl"
failed with the message:

  Failed to connect to bus: No such file or directory

What bus (dbus?) and why is it missing?

jl

On Sat, Dec 01, 2018 at 02:47:08PM -0500, Jon LaBadie wrote:
> My primary system was still running Fedora 26 and I'm in the process of
> updating stepwise using the dnf-system-upgrade plugin.
> 
> The download and update to F27 seemed to go fine.  But reboots fail
> and put me in "emergency/rescue" mode.
> 
> Once I've logged in as root and su'ed to my personal account, I can
> turn networking on, run startx or mate-session for a desktop session.
> VirtualBox also works in the desktop.
> 
> Hardware if pertainent:
>   MB    Gigabyte X79-UP4
>   CPU   Intel 3930K at 3.8GHz
>   MEM   32GB
>   VID   nVidia GTX 660 Ti
>   DISK  4, Mix of SSD and rotating,
>         all but /boot managed by LVM
>   KERN  4.18.19-100.fc27.x86_64
> 
> I've cut and pasted the error messages from 'journalctl -b' (i.e.,
> the ones colored red) and include a little context on some.
> 
> I do not see the problem, hopefully others will.
> 
> Error output from "journalctl -b".
> 
> There were 12 pairs of these messages varying only in the string "_SB.C00X".
> The "X" was hex 0-B.
> Fedora 24, 25, and 26 gave these same messages but ran ok.
> 
> Nov 30 18:29:22 cyber.jgcomp.com kernel: ACPI BIOS Error (bug): Could not resolve [\TST0], AE_NOT_FOUND (20180531/psargs-330)
> Nov 30 18:29:22 cyber.jgcomp.com kernel: ACPI Error: Method parse/execution failed \_SB.C000._TPC, AE_NOT_FOUND (20180531/psparse-516)
> 
> 
> The vbox modules mentioned in these message were loaded into the kernel
> at another point.  VirtualBox (Windows 7) runs ok.
> 
> Nov 30 18:29:22 cyber.jgcomp.com systemd-modules-load[304]: Failed to find module vboxdrv
> Nov 30 18:29:22 cyber.jgcomp.com systemd-modules-load[304]: Failed to find module vboxnetflt
> Nov 30 18:29:22 cyber.jgcomp.com systemd-modules-load[304]: Failed to find module vboxnetadp
> Nov 30 18:29:22 cyber.jgcomp.com systemd-modules-load[304]: Failed to find module vboxpci
> 
> 
> Nov 30 18:29:24 cyber.jgcomp.com systemd-udevd[825]: Specified group plugdev unknown
> 
> 
> These messages are correct, I'm not using ECC memory.
> Fedora 26 had same messages but worked fine.
> 
> Nov 30 18:29:25 cyber.jgcomp.com kernel: EDAC sbridge: CPU SrcID #0, Ha #0, Channel #0 has DIMMs, but ECC is disabled
> Nov 30 18:29:25 cyber.jgcomp.com kernel: EDAC sbridge: Couldn't find mci handler
> Nov 30 18:29:25 cyber.jgcomp.com kernel: EDAC sbridge: Failed to register device with error -19.
> ...
> Nov 30 18:29:25 cyber.jgcomp.com kernel: EDAC sbridge: CPU SrcID #0, Ha #0, Channel #0 has DIMMs, but ECC is disabled
> Nov 30 18:29:25 cyber.jgcomp.com kernel: EDAC sbridge: Couldn't find mci handler
> Nov 30 18:29:25 cyber.jgcomp.com kernel: EDAC sbridge: Failed to register device with error -19.
> 
> 
> Only last line colored red by 'journalctl (hold queue overflow)'
> 
> Nov 30 18:29:30 cyber.jgcomp.com kernel: kauditd_printk_skb: 115 callbacks suppressed
> Nov 30 18:29:30 cyber.jgcomp.com kernel: audit: type=1131 audit(1543620570.726:96): pid=1 uid=0 auid=4294967295 ses=4294967295 subj=system_u:system_r:init_t:s0 msg='unit=
> Nov 30 18:29:30 cyber.jgcomp.com kernel: audit: audit_lost=38 audit_rate_limit=0 audit_backlog_limit=64
> Nov 30 18:29:30 cyber.jgcomp.com kernel: audit: kauditd hold queue overflow
> 
> 
> As above, only the "hold queue overflow" lines were colored
> 
> Nov 30 18:29:34 cyber.jgcomp.com audit[1]: SERVICE_START pid=1 uid=0 auid=4294967295 ses=4294967295 subj=system_u:system_r:init_t:s0 msg='unit=dracut-shutdown comm="systemd" exe="/usr/lib/systemd/systemd" hostname=? addr=? terminal=? res=success'
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: type=1130 audit(1543620574.804:97): pid=1 uid=0 auid=4294967295 ses=4294967295 subj=system_u:system_r:init_t:s0 msg='unit=dracut-shutdown comm="systemd" exe="/usr/lib/systemd/systemd" hostname=? addr=? terminal=? res=success'
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: audit_lost=39 audit_rate_limit=0 audit_backlog_limit=64
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: kauditd hold queue overflow
> Nov 30 18:29:34 cyber.jgcomp.com audit[1]: SERVICE_START pid=1 uid=0 auid=4294967295 ses=4294967295 subj=system_u:system_r:init_t:s0 msg='unit=plymouth-read-write comm="systemd" exe="/usr/lib/systemd/systemd" hostname=? addr=? terminal=? res=success'
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: type=1130 audit(1543620574.816:98): pid=1 uid=0 auid=4294967295 ses=4294967295 subj=system_u:system_r:init_t:s0 msg='unit=plymouth-read-write comm="systemd" exe="/usr/lib/systemd/systemd" hostname=? addr=? terminal=? res=success'
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: audit_lost=40 audit_rate_limit=0 audit_backlog_limit=64
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: kauditd hold queue overflow
> Nov 30 18:29:34 cyber.jgcomp.com kernel: audit: type=1131 audit(1543620574.816:99): pid=1 uid=0 auid=4294967295 ses=4294967295 subj=system_u:system_r:init_t:s0 msg='unit=plymouth-read-write comm="systemd" exe="/usr/lib/systemd/systemd" hostname=? addr=? terminal=? res=success'
> 
> 
> This may be after login as root to "rescue mode" and "su-ing to my personal account.
> 
> Nov 30 18:29:54 cyber.jgcomp.com su[1727]: pam_systemd(su-l:session): Failed to connect to system bus: No such file or directory
> 
> 
> Any ideas?
> 
> Jon
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