I wrote a .spec file to build a meta pacakge with many shared librairies
installed by Intel parallel studio 2016. The spec file is attached.
There is no Fedora package for Intel, but the installation script
install many .rpm packages, and all are correctly listed when running
$ dnf list | grep intel
214:intel-ccomp-doc.noarch 2016.0-047
@System
215:intel-comp-all-doc.noarch 16.0.0-109
@System
216:intel-comp-l-all-common-109.noarch 16.0.0-109
@System
217:intel-comp-l-all-devel-109.x86_64 16.0.0-109
@System
..................etc...................
Building the rpm package went fine but I am left with one issue when installing.
# dnf install R-3.2.2-intel.fc22.1.x86_64.rpm
R-devel-3.2.2-intel.fc22.1.x86_64.rpm
R-core-devel-3.2.2-intel.fc22.1.x86_64.rpm
R-java-3.2.2-intel.fc22.1.x86_64.rpm
R-core-3.2.2-intel.fc22.1.x86_64.rpm
R-java-devel-3.2.2-intel.fc22.1.x86_64.rpm
libRmath-devel-3.2.2-intel.fc22.1.x86_64.rpm
libRmath-3.2.2-intel.fc22.1.x86_64.rpm
Error: nothing provides libimf.so()(64bit) needed by
libRmath-3.2.2-intel.fc22.1.x86_64.
nothing provides libifcoremt.so.5()(64bit) needed by
R-core-3.2.2-intel.fc22.1.x86_64.
nothing provides libimf.so()(64bit) needed by
libRmath-3.2.2-intel.fc22.1.x86_64.
nothing provides libifcoremt.so.5()(64bit) needed by
R-core-3.2.2-intel.fc22.1.x86_64.
nothing provides libifcoremt.so.5()(64bit) needed by
R-core-3.2.2-intel.fc22.1.x86_64.
nothing provides libifcoremt.so.5()(64bit) needed by
R-core-3.2.2-intel.fc22.1.x86_64.
nothing provides libifcoremt.so.5()(64bit) needed by
R-core-3.2.2-intel.fc22.1.x86_64.
nothing provides libifcoremt.so.5()(64bit) needed by
R-core-3.2.2-intel.fc22.1.x86_64
These share libs are in /opt/intel/lib/intel64/
$ ls /opt/intel/lib/intel64/
.............
libifcoremt.so.5
libimf.so
...............
$ ls /etc/ld.so.conf.d
bind99-x86_64.conf intel-compiler-base.conf intel-fortran.conf
intel-mkl.conf intel-openmp.conf
with all correct path to shared libs
***************************
I do not see where this issue comes from. I would like to avoir # rpm
-i --no-deps to install my package. Why the <nothing provides
libifcoremt.so.5()(64bit) needed by R-core-3.2.2-intel.fc22.1.x86_64.>
message is repeating 5 times?
Thank you for any hints where to look.
google.com/+arnaudgabourygabx
%define java_arch amd64
%global _sysconfdir /etc/R
Name: R
Version: 3.2.2
Release: intel%{?dist}.1
Summary: A language for data analysis and graphics
URL: http://www.r-project.org
Source0: ftp://cran.r-project.org/pub/R/src/base/R-3/R-%{version}.tar.gz
License: GPLv2+
Group: Applications/Engineering
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildRequires: gcc-gfortran
BuildRequires: gcc-c++, tex(latex), texinfo, texinfo-tex
BuildRequires: libpng-devel, libjpeg-turbo-devel, readline-devel
BuildRequires: tcl-devel, tk-devel, ncurses-devel
BuildRequires: pcre-devel, zlib-devel
BuildRequires: libcurl-devel
BuildRequires: valgrind-devel
BuildRequires: java-headless
BuildRequires: tre-devel
BuildRequires: autoconf, automake, libtool
BuildRequires: libSM-devel, libICE-devel, libXt-devel
BuildRequires: bzip2-devel, libtiff-devel
BuildRequires: gcc-objc, xz-devel
BuildRequires: libicu-devel
BuildRequires: less
BuildRequires: tex(inconsolata.sty)
BuildRequires: tex(upquote.sty)
BuildRequires: lapack
BuildRequires: intel-openmp-l-all-109
BuildRequires: intel-ifort-l-ps-109
# R-devel will pull in R-core
Requires: R-devel = %{version}-%{release}
# libRmath-devel will pull in libRmath
Requires: libRmath-devel = %{version}-%{release}
# Pull in Java bits (if you don't want this, use R-core)
Requires: R-java = %{version}-%{release}
%description
This is a metapackage that provides both core R userspace and
all R development components.
R is a language and environment for statistical computing and graphics.
R is similar to the award-winning S system, which was developed at
Bell Laboratories by John Chambers et al. It provides a wide
variety of statistical and graphical techniques (linear and
nonlinear modelling, statistical tests, time series analysis,
classification, clustering, ...).
R is designed as a true computer language with control-flow
constructions for iteration and alternation, and it allows users to
add additional functionality by defining new functions. For
computationally intensive tasks, C, C++ and Fortran code can be linked
and called at run time.
%package core
Summary: The minimal R components necessary for a functional runtime
Group: Applications/Engineering
Requires: xdg-utils, cups
Requires: tex(dvips), vi
Requires: perl, sed, gawk, tex(latex), less, make, unzip
# These are the submodules that R-core provides. Sometimes R modules say they
# depend on one of these submodules rather than just R. These are provided for
# packager convenience.
Provides: R-base = %{version}
Provides: R-boot = 1.3.17
Provides: R-class = 7.3.13
Provides: R-cluster = 2.0.3
Provides: R-codetools = 0.2.14
Provides: R-datasets = %{version}
Provides: R-foreign = 0.8.65
Provides: R-graphics = %{version}
Provides: R-grDevices = %{version}
Provides: R-grid = %{version}
Provides: R-KernSmooth = 2.23.15
Provides: R-lattice = 0.20.33
Provides: R-MASS = 7.3.43
Provides: R-Matrix = 1.2.2
#Obsoletes: R-Matrix < 0.999375-7
Provides: R-methods = %{version}
Provides: R-mgcv = 1.8.7
Provides: R-nlme = 3.1.121
Provides: R-nnet = 7.3.10
Provides: R-parallel = %{version}
Provides: R-rpart = 4.1.10
Provides: R-spatial = 7.3.10
Provides: R-splines = %{version}
Provides: R-stats = %{version}
Provides: R-stats4 = %{version}
Provides: R-survival = 2.38.3
Provides: R-tcltk = %{version}
Provides: R-tools = %{version}
Provides: R-utils = %{version}
%description core
A language and environment for statistical computing and graphics.
R is similar to the award-winning S system, which was developed at
Bell Laboratories by John Chambers et al. It provides a wide
variety of statistical and graphical techniques (linear and
nonlinear modelling, statistical tests, time series analysis,
classification, clustering, ...).
R is designed as a true computer language with control-flow
constructions for iteration and alternation, and it allows users to
add additional functionality by defining new functions. For
computationally intensive tasks, C, C++ and Fortran code can be linked
and called at run time.
%package core-devel
Summary: Core files for development of R packages (no Java)
Group: Applications/Engineering
Requires: R-core = %{version}-%{release}
# You need all the BuildRequires for the development version
Requires: gcc-c++, gcc-gfortran, tex(latex), texinfo, texinfo-tex
Requires: bzip2-devel, pcre-devel, zlib-devel
Requires: tcl-devel, tk-devel, pkgconfig, xz-devel
Requires: libicu-devel
Requires: tre-devel
# TeX files needed
Requires: tex(ecrm1000.tfm)
Requires: tex(inconsolata.sty)
Requires: tex(ptmr8t.tfm)
Requires: tex(ptmb8t.tfm)
Requires: tex(pcrr8t.tfm)
Requires: tex(phvr8t.tfm)
Requires: tex(ptmri8t.tfm)
Requires: tex(ptmro8t.tfm)
Requires: tex(cm-super-ts1.enc)
Provides: R-Matrix-devel = 1.2.2
Obsoletes: R-Matrix-devel < 0.999375-7
%description core-devel
Install R-core-devel if you are going to develop or compile R packages.
This package does not configure the R environment for Java, install
R-java-devel if you want this.
%package devel
Summary: Full R development environment metapackage
Requires: R-core-devel = %{version}-%{release}
Requires: R-java-devel = %{version}-%{release}
%description devel
This is a metapackage to install a complete (with Java) R development
environment.
%package java
Summary: R with Fedora provided Java Runtime Environment
Group: Applications/Engineering
Requires(post): R-core = %{version}-%{release}
Requires(post): java-headless
%description java
A language and environment for statistical computing and graphics.
R is similar to the award-winning S system, which was developed at
Bell Laboratories by John Chambers et al. It provides a wide
variety of statistical and graphical techniques (linear and
nonlinear modelling, statistical tests, time series analysis,
classification, clustering, ...).
R is designed as a true computer language with control-flow
constructions for iteration and alternation, and it allows users to
add additional functionality by defining new functions. For
computationally intensive tasks, C, C++ and Fortran code can be linked
and called at run time.
This package also has an additional dependency on java, as provided by
Fedora's openJDK.
%package java-devel
Summary: Development package for use with Java enabled R components
Group: Applications/Engineering
Requires(post): R-core-devel = %{version}-%{release}
Requires(post): java-devel
%description java-devel
Install R-java-devel if you are going to develop or compile R packages
that assume java is present and configured on the system.
%package -n libRmath
Summary: Standalone math library from the R project
Group: Development/Libraries
%description -n libRmath
A standalone library of mathematical and statistical functions derived
from the R project. This package provides the shared libRmath library.
%package -n libRmath-devel
Summary: Headers from the R Standalone math library
Group: Development/Libraries
Requires: libRmath = %{version}-%{release}, pkgconfig
BuildRequires: intel-openmp-l-all-109
%description -n libRmath-devel
A standalone library of mathematical and statistical functions derived
from the R project. This package provides the libRmath header files.
%package -n libRmath-static
Summary: Static R Standalone math library
Group: Development/Libraries
Requires: libRmath-devel = %{version}-%{release}
%description -n libRmath-static
A standalone library of mathematical and statistical functions derived
from the R project. This package provides the static libRmath library.
%prep
%setup -q
%global _builddir_full %{_builddir}/R-%{version}
cat <<EOF > %{name}-prov
#!/bin/sh
%{__perl_provides} \
| grep -v 'File::Copy::Recursive' | grep -v 'Text::DelimMatch'
EOF
%define __perl_provides %{_builddir}/R-%{version}/%{name}-prov
chmod +x %{__perl_provides}
# Filter unwanted Requires:
cat << \EOF > %{name}-req
#!/bin/sh
%{__perl_requires} \
| grep -v 'perl(Text::DelimMatch)'
EOF
%define __perl_requires %{_builddir}/R-%{version}/%{name}-req
chmod +x %{__perl_requires}
# needed by sysconfdir
mkdir -p %{_builddir_full}/etc/R
%build
# Add PATHS to Renviron for R_LIBS_SITE
echo 'R_LIBS_SITE=${R_LIBS_SITE-'"'/usr/local/lib/R/site-library:/usr/local/lib/R/library:%{_libdir}/R/library:%{_datadir}/R/library'"'}' >> etc/Renviron.in
## Intel MKL and ICC
# Setup the environment for MKL and Intel compiler
source /opt/intel/bin/compilervars.sh intel64
%global _mkllibpath ${MKLROOT}/lib/intel64/
%global _icclibpath /opt/intel/compilers_and_libraries_linux/lib/intel64
%define R_PDFVIEWER %{_bindir}/xdg-open
%define R_PRINTCMD lpr
%define R_BROWSER %{_bindir}/xdg-open
# Use Intel compiler
export CC="icc"
export F77="ifort"
export FC="ifort"
export CXX="icpc"
export AR="xiar"
export LD="xild"
MKL=" -L%{_mkllibpath} -lmkl_rt -lpthread"
# Export build flags
export LDFLAGS="${LDFLAGS} -L%{_icclibpath}"
export MAIN_LDFLAGS="-qopenmp"
export CFLAGS="-O3 -ipo -wd188 -qopenmp -qopt-mem-layout-trans=3 -xHost -I${MKLROOT}/include"
export CXXFLAGS="-O3 -ipo -wd188 -qopenmp -qopt-mem-layout-trans=3 -xHost -I${MKLROOT}/include"
export FFLAGS="-O3 -ipo -qopenmp -qopt-mem-layout-trans=3 -xHost -I${MKLROOT}/include"
export FCFLAGS="-O3 -ipo -wd188 -qopenmp -qopt-mem-layout-trans=3 -xHost -I${MKLROOT}/include"
%configure \
--with-system-tre \
--with-system-zlib --with-system-bzlib --with-system-pcre \
--with-system-valgrind-headers \
--with-blas="$MKL" \
--without-x \
--disable-byte-compiled-packages \
--with-tcl-config=%{_libdir}/tclConfig.sh \
--with-tk-config=%{_libdir}/tkConfig.sh \
--enable-R-shlib \
--enable-memory-profiling \
--enable-BLAS-shlib \
--enable-prebuilt-html \
rdocdir=%{_docdir}/R\
rincludedir=%{_includedir}/R \
rsharedir=%{_datadir}/R \
> CONFIGURE.log
cat CONFIGURE.log | grep -A30 'R is now' - > CAPABILITIES
make %{?_smp_mflags}
make %{?_smp_mflags} MAKEINFO=texi2any pdf
make %{?_smp_mflags} MAKEINFO=texi2any info
# Make standalone Rmath library
(cd src/nmath/standalone; make %{?_smp_mflags})
# Convert to UTF-8
for i in doc/manual/R-intro.info doc/manual/R-FAQ.info doc/FAQ doc/manual/R-admin.info doc/manual/R-exts.info-1; do
iconv -f iso-8859-1 -t utf-8 -o $i{.utf8,}
mv $i{.utf8,}
done
%install
make DESTDIR=%{buildroot} install install-info
make DESTDIR=%{buildroot} install-pdf
make DESTDIR=%{buildroot} install-tests
mkdir -p %{buildroot}%{?_pkgdocdir}%{!?_pkgdocdir:%{_docdir}/%{name}-%{version}}
install -p CAPABILITIES %{buildroot}%{?_pkgdocdir}%{!?_pkgdocdir:%{_docdir}/%{name}-%{version}}
# install libRmath.so
(cd src/nmath/standalone; make install DESTDIR=%{buildroot})
# Install R.conf
mkdir -p %{buildroot}/etc/ld.so.conf.d
echo "%{_libdir}/R/lib" > %{buildroot}/etc/ld.so.conf.d/%{name}-x86_64.conf
mkdir -p %{buildroot}%{_datadir}/R/library
# Fixup R wrapper scripts.
sed -i "s|%{buildroot} ||" "%{buildroot}/usr/bin/R"
rm "%{buildroot}/usr/lib64/R/bin/R"
cd "%{buildroot}/usr/lib64/R/bin"
ln -s ../../../bin/R
# Fix multilib
#touch README %{buildroot}%{_datadir}doc/R/manual/*.pdf
#touch README %{buildroot}%{_bindir}/R
# Fix html/packages.html
# We can safely use RHOME here, because all of these are system packages.
sed -i 's|\..\/\..|%{_libdir}/R|g' %{buildroot}%{?_pkgdocdir}%{!?_pkgdocdir:%{_docdir}/%{name}-%{version}}/html/packages.html
for i in %{buildroot}%{_libdir}/R/library/*/html/*.html; do
sed -i 's|\..\/\..\/..\/doc|%{?_pkgdocdir}%{!?_pkgdocdir:%{_docdir}/%{name}-%{version}}|g' $i
done
# Fix exec bits
chmod +x %{buildroot}%{_datadir}/R/sh/echo.sh
# Symbolic link for convenience
pushd %{buildroot}%{_libdir}/R
ln -s ../../include/R include
popd
# move configuration files to /etc
mkdir -p %{buildroot}/etc/R/
cd %{buildroot}/usr/lib64/R/etc
install -d %{buildroot}/etc/R/
cd %{buildroot}/usr/lib64/R/etc
for i in *; do
mv -f ${i} "%{buildroot}/etc/R"
ln -s /etc/R/${i} ${i}
done
# Symbolic link for LaTeX
mkdir -p %{buildroot}/usr/share/texmf/tex/latex
pushd %{buildroot}/usr/share/texmf/tex/latex
ln -s ../../../R/texmf/tex/latex R
popd
%check
make check-all
%files
# Metapackage
%files core
%defattr(-, root, root, -)
%{_bindir}/R
%{_bindir}/Rscript
%{_datadir}/R/
%{_datadir}/texmf/
# Have to break this out for the translations
%dir %{_libdir}/R/
%{_libdir}/R/tests/
%{_libdir}/R/bin/
%dir %{_libdir}/R/etc
%{_libdir}/R/etc/Makeconf
%{_libdir}/R/etc/Renviron
%{_libdir}/R/etc/javaconf
%{_libdir}/R/etc/ldpaths
%{_libdir}/R/etc/repositories
%{_libdir}/R/lib/
%dir %{_libdir}/R/library/
%dir %{_libdir}/R/library/translations/
%{_libdir}/R/library/translations/DESCRIPTION
%lang(da) %{_libdir}/R/library/translations/da/
%lang(de) %{_libdir}/R/library/translations/de/
%lang(en) %{_libdir}/R/library/translations/en*/
%lang(es) %{_libdir}/R/library/translations/es/
%lang(fa) %{_libdir}/R/library/translations/fa/
%lang(fr) %{_libdir}/R/library/translations/fr/
%lang(it) %{_libdir}/R/library/translations/it/
%lang(ja) %{_libdir}/R/library/translations/ja/
%lang(ko) %{_libdir}/R/library/translations/ko/
%lang(nn) %{_libdir}/R/library/translations/nn/
%lang(pl) %{_libdir}/R/library/translations/pl/
%lang(pt) %{_libdir}/R/library/translations/pt*/
%lang(ru) %{_libdir}/R/library/translations/ru/
%lang(tr) %{_libdir}/R/library/translations/tr/
%lang(zh) %{_libdir}/R/library/translations/zh*/
# base
%{_libdir}/R/library/base/
# boot
%dir %{_libdir}/R/library/boot/
%{_libdir}/R/library/boot/bd.q
%{_libdir}/R/library/boot/CITATION
%{_libdir}/R/library/boot/data/
%{_libdir}/R/library/boot/DESCRIPTION
%{_libdir}/R/library/boot/help/
%{_libdir}/R/library/boot/html/
%{_libdir}/R/library/boot/INDEX
%{_libdir}/R/library/boot/Meta/
%{_libdir}/R/library/boot/NAMESPACE
%{_libdir}/R/library/boot/tests/
%dir %{_libdir}/R/library/boot/po/
%lang(de) %{_libdir}/R/library/boot/po/de/
%lang(en) %{_libdir}/R/library/boot/po/en*/
%lang(fr) %{_libdir}/R/library/boot/po/fr/
%lang(ko) %{_libdir}/R/library/boot/po/ko/
%lang(pl) %{_libdir}/R/library/boot/po/pl/
%lang(ru) %{_libdir}/R/library/boot/po/ru/
%{_libdir}/R/library/boot/R/
# class
%dir %{_libdir}/R/library/class/
%{_libdir}/R/library/class/CITATION
%{_libdir}/R/library/class/DESCRIPTION
%{_libdir}/R/library/class/help/
%{_libdir}/R/library/class/html/
%{_libdir}/R/library/class/INDEX
%{_libdir}/R/library/class/libs/
%{_libdir}/R/library/class/Meta/
%{_libdir}/R/library/class/NAMESPACE
%{_libdir}/R/library/class/NEWS
%dir %{_libdir}/R/library/class/po/
%lang(de) %{_libdir}/R/library/class/po/de/
%lang(en) %{_libdir}/R/library/class/po/en*/
%lang(fr) %{_libdir}/R/library/class/po/fr/
%lang(ko) %{_libdir}/R/library/class/po/ko/
%lang(pl) %{_libdir}/R/library/class/po/pl/
%{_libdir}/R/library/class/R/
# cluster
%dir %{_libdir}/R/library/cluster/
%{_libdir}/R/library/cluster/CITATION
%{_libdir}/R/library/cluster/data/
%{_libdir}/R/library/cluster/DESCRIPTION
%{_libdir}/R/library/cluster/help/
%{_libdir}/R/library/cluster/html/
%{_libdir}/R/library/cluster/INDEX
%{_libdir}/R/library/cluster/libs/
%{_libdir}/R/library/cluster/Meta/
%{_libdir}/R/library/cluster/NAMESPACE
%{_libdir}/R/library/cluster/NEWS.Rd
%{_libdir}/R/library/cluster/R/
%{_libdir}/R/library/cluster/tests/
%dir %{_libdir}/R/library/cluster/po/
%lang(de) %{_libdir}/R/library/cluster/po/de/
%lang(en) %{_libdir}/R/library/cluster/po/en*/
%lang(fr) %{_libdir}/R/library/cluster/po/fr/
%lang(ko) %{_libdir}/R/library/cluster/po/ko/
%lang(pl) %{_libdir}/R/library/cluster/po/pl/
# codetools
%dir %{_libdir}/R/library/codetools/
%{_libdir}/R/library/codetools/DESCRIPTION
%{_libdir}/R/library/codetools/help/
%{_libdir}/R/library/codetools/html/
%{_libdir}/R/library/codetools/INDEX
%{_libdir}/R/library/codetools/Meta/
%{_libdir}/R/library/codetools/NAMESPACE
%{_libdir}/R/library/codetools/R/
%{_libdir}/R/library/codetools/tests/
# compiler
%{_libdir}/R/library/compiler/
# datasets
%{_libdir}/R/library/datasets/
# foreign
%dir %{_libdir}/R/library/foreign/
%{_libdir}/R/library/foreign/COPYRIGHTS
%{_libdir}/R/library/foreign/DESCRIPTION
%{_libdir}/R/library/foreign/files/
%{_libdir}/R/library/foreign/help/
%{_libdir}/R/library/foreign/html/
%{_libdir}/R/library/foreign/INDEX
%{_libdir}/R/library/foreign/libs/
%{_libdir}/R/library/foreign/Meta/
%{_libdir}/R/library/foreign/NAMESPACE
%{_libdir}/R/library/foreign/tests/
%dir %{_libdir}/R/library/foreign/po/
%lang(de) %{_libdir}/R/library/foreign/po/de/
%lang(en) %{_libdir}/R/library/foreign/po/en*/
%lang(fr) %{_libdir}/R/library/foreign/po/fr/
%lang(pl) %{_libdir}/R/library/foreign/po/pl/
%{_libdir}/R/library/foreign/R/
# graphics
%{_libdir}/R/library/graphics/
# grDevices
%{_libdir}/R/library/grDevices
# grid
%{_libdir}/R/library/grid/
# KernSmooth
%dir %{_libdir}/R/library/KernSmooth/
%{_libdir}/R/library/KernSmooth/DESCRIPTION
%{_libdir}/R/library/KernSmooth/help/
%{_libdir}/R/library/KernSmooth/html/
%{_libdir}/R/library/KernSmooth/INDEX
%{_libdir}/R/library/KernSmooth/libs/
%{_libdir}/R/library/KernSmooth/Meta/
%{_libdir}/R/library/KernSmooth/NAMESPACE
%{_libdir}/R/library/KernSmooth/tests
%dir %{_libdir}/R/library/KernSmooth/po/
%lang(de) %{_libdir}/R/library/KernSmooth/po/de/
%lang(en) %{_libdir}/R/library/KernSmooth/po/en*/
%lang(fr) %{_libdir}/R/library/KernSmooth/po/fr/
%lang(ko) %{_libdir}/R/library/KernSmooth/po/ko/
%lang(pl) %{_libdir}/R/library/KernSmooth/po/pl/
%{_libdir}/R/library/KernSmooth/R/
# lattice
%dir %{_libdir}/R/library/lattice/
%{_libdir}/R/library/lattice/CITATION
%{_libdir}/R/library/lattice/data/
%{_libdir}/R/library/lattice/demo/
%{_libdir}/R/library/lattice/DESCRIPTION
%{_libdir}/R/library/lattice/help/
%{_libdir}/R/library/lattice/html/
%{_libdir}/R/library/lattice/INDEX
%{_libdir}/R/library/lattice/libs/
%{_libdir}/R/library/lattice/Meta/
%{_libdir}/R/library/lattice/NAMESPACE
%{_libdir}/R/library/lattice/NEWS
%{_libdir}/R/library/lattice/tests/
%dir %{_libdir}/R/library/lattice/po/
%lang(de) %{_libdir}/R/library/lattice/po/de/
%lang(en) %{_libdir}/R/library/lattice/po/en*/
%lang(fr) %{_libdir}/R/library/lattice/po/fr/
%lang(ko) %{_libdir}/R/library/lattice/po/ko/
%lang(pl) %{_libdir}/R/library/lattice/po/pl*/
%{_libdir}/R/library/lattice/R/
# MASS
%dir %{_libdir}/R/library/MASS/
%{_libdir}/R/library/MASS/CITATION
%{_libdir}/R/library/MASS/data/
%{_libdir}/R/library/MASS/DESCRIPTION
%{_libdir}/R/library/MASS/help/
%{_libdir}/R/library/MASS/html/
%{_libdir}/R/library/MASS/INDEX
%{_libdir}/R/library/MASS/libs/
%{_libdir}/R/library/MASS/Meta/
%{_libdir}/R/library/MASS/NAMESPACE
%{_libdir}/R/library/MASS/NEWS
%{_libdir}/R/library/MASS/tests/
%dir %{_libdir}/R/library/MASS/po
%lang(de) %{_libdir}/R/library/MASS/po/de/
%lang(en) %{_libdir}/R/library/MASS/po/en*/
%lang(fr) %{_libdir}/R/library/MASS/po/fr/
%lang(ko) %{_libdir}/R/library/MASS/po/ko/
%lang(pl) %{_libdir}/R/library/MASS/po/pl/
%{_libdir}/R/library/MASS/R/
%{_libdir}/R/library/MASS/scripts/
# Matrix
%dir %{_libdir}/R/library/Matrix/
%{_libdir}/R/library/Matrix/Copyrights
%{_libdir}/R/library/Matrix/data/
%{_libdir}/R/library/Matrix/doc/
%{_libdir}/R/library/Matrix/DESCRIPTION
%{_libdir}/R/library/Matrix/Doxyfile
%{_libdir}/R/library/Matrix/external/
%{_libdir}/R/library/Matrix/help/
%{_libdir}/R/library/Matrix/html/
%{_libdir}/R/library/Matrix/include/
%{_libdir}/R/library/Matrix/INDEX
%{_libdir}/R/library/Matrix/libs/
%{_libdir}/R/library/Matrix/Meta/
%{_libdir}/R/library/Matrix/NAMESPACE
%{_libdir}/R/library/Matrix/NEWS.Rd
%{_libdir}/R/library/Matrix/tests
%dir %{_libdir}/R/library/Matrix/po/
%lang(de) %{_libdir}/R/library/Matrix/po/de/
%lang(en) %{_libdir}/R/library/Matrix/po/en*/
%lang(fr) %{_libdir}/R/library/Matrix/po/fr/
%lang(ko) %{_libdir}/R/library/Matrix/po/ko/
%lang(pl) %{_libdir}/R/library/Matrix/po/pl/
%{_libdir}/R/library/Matrix/R/
%{_libdir}/R/library/Matrix/test-tools.R
%{_libdir}/R/library/Matrix/test-tools-1.R
%{_libdir}/R/library/Matrix/test-tools-Matrix.R
# methods
%{_libdir}/R/library/methods/
# mgcv
%{_libdir}/R/library/mgcv/
# nlme
%dir %{_libdir}/R/library/nlme/
%{_libdir}/R/library/nlme/CITATION
%{_libdir}/R/library/nlme/data/
%{_libdir}/R/library/nlme/DESCRIPTION
%{_libdir}/R/library/nlme/help/
%{_libdir}/R/library/nlme/html/
%{_libdir}/R/library/nlme/INDEX
%{_libdir}/R/library/nlme/libs/
%{_libdir}/R/library/nlme/Meta/
%{_libdir}/R/library/nlme/mlbook/
%{_libdir}/R/library/nlme/NAMESPACE
%{_libdir}/R/library/nlme/tests/
%dir %{_libdir}/R/library/nlme/po/
%lang(de) %{_libdir}/R/library/nlme/po/de/
%lang(en) %{_libdir}/R/library/nlme/po/en*/
%lang(fr) %{_libdir}/R/library/nlme/po/fr/
%lang(ko) %{_libdir}/R/library/nlme/po/ko/
%lang(pl) %{_libdir}/R/library/nlme/po/pl/
%{_libdir}/R/library/nlme/R/
%{_libdir}/R/library/nlme/scripts/
# nnet
%dir %{_libdir}/R/library/nnet/
%{_libdir}/R/library/nnet/CITATION
%{_libdir}/R/library/nnet/DESCRIPTION
%{_libdir}/R/library/nnet/help/
%{_libdir}/R/library/nnet/html/
%{_libdir}/R/library/nnet/INDEX
%{_libdir}/R/library/nnet/libs/
%{_libdir}/R/library/nnet/Meta/
%{_libdir}/R/library/nnet/NAMESPACE
%{_libdir}/R/library/nnet/NEWS
%dir %{_libdir}/R/library/nnet/po
%lang(de) %{_libdir}/R/library/nnet/po/de/
%lang(en) %{_libdir}/R/library/nnet/po/en*/
%lang(fr) %{_libdir}/R/library/nnet/po/fr/
%lang(ko) %{_libdir}/R/library/nnet/po/ko/
%lang(pl) %{_libdir}/R/library/nnet/po/pl/
%{_libdir}/R/library/nnet/R/
# parallel
%{_libdir}/R/library/parallel/
# rpart
%dir %{_libdir}/R/library/rpart/
%{_libdir}/R/library/rpart/data/
%{_libdir}/R/library/rpart/DESCRIPTION
%{_libdir}/R/library/rpart/doc/
%{_libdir}/R/library/rpart/help/
%{_libdir}/R/library/rpart/html/
%{_libdir}/R/library/rpart/INDEX
%{_libdir}/R/library/rpart/libs/
%{_libdir}/R/library/rpart/Meta/
%{_libdir}/R/library/rpart/NAMESPACE
%{_libdir}/R/library/rpart/NEWS.Rd
%{_libdir}/R/library/rpart/tests/
%dir %{_libdir}/R/library/rpart/po
%lang(de) %{_libdir}/R/library/rpart/po/de/
%lang(en) %{_libdir}/R/library/rpart/po/en*/
%lang(fr) %{_libdir}/R/library/rpart/po/fr/
%lang(ko) %{_libdir}/R/library/rpart/po/ko/
%lang(pl) %{_libdir}/R/library/rpart/po/pl/
%lang(ru) %{_libdir}/R/library/rpart/po/ru/
%{_libdir}/R/library/rpart/R/
# spatial
%dir %{_libdir}/R/library/spatial/
%{_libdir}/R/library/spatial/CITATION
%{_libdir}/R/library/spatial/DESCRIPTION
%{_libdir}/R/library/spatial/help/
%{_libdir}/R/library/spatial/html/
%{_libdir}/R/library/spatial/INDEX
%{_libdir}/R/library/spatial/libs/
%{_libdir}/R/library/spatial/Meta/
%{_libdir}/R/library/spatial/NAMESPACE
%{_libdir}/R/library/spatial/NEWS
%{_libdir}/R/library/spatial/tests/Examples/
%dir %{_libdir}/R/library/spatial/po
%lang(de) %{_libdir}/R/library/spatial/po/de/
%lang(en) %{_libdir}/R/library/spatial/po/en*/
%lang(fr) %{_libdir}/R/library/spatial/po/fr/
%lang(ko) %{_libdir}/R/library/spatial/po/ko/
%lang(pl) %{_libdir}/R/library/spatial/po/pl/
%{_libdir}/R/library/spatial/ppdata/
%{_libdir}/R/library/spatial/PP.files
%{_libdir}/R/library/spatial/R/
# splines
%{_libdir}/R/library/splines/
# stats
%{_libdir}/R/library/stats/
# stats4
%{_libdir}/R/library/stats4/
# survival
%{_libdir}/R/library/survival/
# tcltk
%{_libdir}/R/library/tcltk/
# tools
%{_libdir}/R/library/tools/
# utils
%{_libdir}/R/library/utils/
%{_libdir}/R/modules
%{_libdir}/R/COPYING
#%%{_libdir}/R/NEWS*
%{_libdir}/R/SVN-REVISION
#/usr/lib/rpm/R-make-search-index.sh
%{_infodir}/R-*.info*
%{_mandir}/man1/*
%{?_pkgdocdir}%{!?_pkgdocdir:%{_docdir}/%{name}-%{version}}
%docdir %{?_pkgdocdir}%{!?_pkgdocdir:%{_docdir}/%{name}-%{version}}
/etc/ld.so.conf.d/*
%config %{_sysconfdir}/*
%{_datarootdir}/info/dir
%files core-devel
%defattr(-, root, root, -)
%{_libdir}/pkgconfig/libR.pc
%{_includedir}/R
# Symlink to %{_includedir}/R/
%{_libdir}/R/include
%files devel
# Nothing, all files provided by R-core-devel
%files java
# Nothing, all files provided by R-core
%files java-devel
# Nothing, all files provided by R-core-devel
%files -n libRmath
%defattr(-, root, root, -)
%doc doc/COPYING
%{_libdir}/libRmath.so
%files -n libRmath-devel
%defattr(-, root, root, -)
%{_includedir}/Rmath.h
%{_libdir}/pkgconfig/libRmath.pc
%files -n libRmath-static
%defattr(-, root, root, -)
%{_libdir}/libRmath.a
%post core
/sbin/ldconfig
/usr/bin/R --add
# Create directory entries for info files
# (optional doc files, so we must check that they are installed)
for doc in admin exts FAQ intro lang; do
file=%{_infodir}/R-${doc}.info.gz
if [ -e $file ]; then
/sbin/install-info ${file} %{_infodir}/dir 2>/dev/null || :
fi
done
R CMD javareconf \
JAVA_HOME=%{_jvmdir}/jre \
JAVA_CPPFLAGS='-I%{_jvmdir}/java/include\ -I%{_jvmdir}/java/include/linux' \
JAVA_LIBS='-L%{_jvmdir}/jre/lib/%{java_arch}/server \
-L%{_jvmdir}/jre/lib/%{java_arch}\ -L%{_jvmdir}/java/lib/%{java_arch} \
-L/usr/java/packages/lib/%{java_arch}\ -L/lib\ -L/usr/lib\ -ljvm' \
JAVA_LD_LIBRARY_PATH=%{_jvmdir}/jre/lib/%{java_arch}/server:%{_jvmdir}/jre/lib/%{java_arch}:%{_jvmdir}/java/lib/%{java_arch}:/usr/java/packages/lib/%{java_arch}:/lib:/usr/lib \
> /dev/null 2>&1 || exit 0
%preun core
if [ $1 = 0 ]; then
# Delete directory entries for info files (if they were installed)
for doc in admin exts FAQ intro lang; do
file=%{_infodir}/R-${doc}.info.gz
if [ -e ${file} ]; then
/sbin/install-info --delete R-${doc} %{_infodir}/dir 2>/dev/null || :
fi
done
fi
%postun core
/sbin/ldconfig
if [ $1 -eq 0 ] ; then
/usr/bin/mktexlsr %{_datadir}/texmf &>/dev/null || :
fi
%posttrans core
/usr/bin/mktexlsr %{_datadir}/texmf &>/dev/null || :
%post java
R CMD javareconf \
JAVA_HOME=%{_jvmdir}/jre \
JAVA_CPPFLAGS='-I%{_jvmdir}/java/include\ -I%{_jvmdir}/java/include/linux' \
JAVA_LIBS='-L%{_jvmdir}/jre/lib/%{java_arch}/server \
-L%{_jvmdir}/jre/lib/%{java_arch}\ -L%{_jvmdir}/java/lib/%{java_arch} \
-L/usr/java/packages/lib/%{java_arch}\ -L/lib\ -L/usr/lib\ -ljvm' \
JAVA_LD_LIBRARY_PATH=%{_jvmdir}/jre/lib/%{java_arch}/server:%{_jvmdir}/jre/lib/%{java_arch}:%{_jvmdir}/java/lib/%{java_arch}:/usr/java/packages/lib/%{java_arch}:/lib:/usr/lib \
> /dev/null 2>&1 || exit 0
%post java-devel
R CMD javareconf \
JAVA_HOME=%{_jvmdir}/jre \
JAVA_CPPFLAGS='-I%{_jvmdir}/java/include\ -I%{_jvmdir}/java/include/linux' \
JAVA_LIBS='-L%{_jvmdir}/jre/lib/%{java_arch}/server \
-L%{_jvmdir}/jre/lib/%{java_arch}\ -L%{_jvmdir}/java/lib/%{java_arch} \
-L/usr/java/packages/lib/%{java_arch}\ -L/lib\ -L/usr/lib\ -ljvm' \
JAVA_LD_LIBRARY_PATH=%{_jvmdir}/jre/lib/%{java_arch}/server:%{_jvmdir}/jre/lib/%{java_arch}:%{_jvmdir}/java/lib/%{java_arch}:/usr/java/packages/lib/%{java_arch}:/lib:/usr/lib \
> /dev/null 2>&1 || exit 0
%post -n libRmath -p /sbin/ldconfig
%postun -n libRmath -p /sbin/ldconfig
%changelog
* Thu Sep 17 2015 gabx <arnaud.gaboury@xxxxxxxxx> - 3.2.2-mkl.1
- Initial draft for R-Intel
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