Re: R-BioC rpm package

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Tom "spot" Callaway wrote:
On Wed, 2007-12-05 at 19:47 -0800, D.Enrique ESCOBAR ESPINOZA wrote:
hi,

In an effort to help the biolinux community
www.biolinux.org ,
I put at your disposition
R-BioC for R 2.5.x for fedora core 6.
Comments for improvement will be welcome.
It is not an official fedora rpm because fedora plans to support only
R.
Unfortunatly is the only fc6 rpm for now but they are more for
previous fc
For example, Fedora already has R-abind.

I know that we have some active efforts in progress to package up all of
the BioConductor RPMS, anyone want to chime in with a status report?

Hi

Fedora supports only R ?
Below is an output of my yum list R-\*

They are not all on the fedora repo yet, but there is several review in progress and more to come.

You can see them all there
http://pingoured.fr/public/fedora/SPECS/
available for Fedora 7 and Fedora 8 in i386 and x86_64.

Would you like to be involved in this project (getting bioconductor on Fedora) ?

Regards,
Pierre
~pingou




Installed Packages
R.x86_64 2.6.1-1.fc8 installed R-ACME.x86_64 1.5.0-1.fc8 installed R-ALL.noarch 1.4.3-1.fc8 installed R-AnnotationDbi.noarch 1.1.6-1.fc8 installed R-BSgenome.noarch 1.7.0-1.fc8 installed R-BSgenome.Celegans.UCSC.ce2.noarch 1.2.0-3.fc8 installed R-BSgenome.Dmelanogaster.FlyBase.r51.noa 1.2.0-2.fc8 installed R-Biobase.x86_64 1.17.3-1.fc8 installed R-Biostrings.x86_64 2.7.2-1.fc8 installed R-BufferedMatrix.x86_64 1.3.0-1.fc8 installed R-BufferedMatrix-devel.x86_64 1.3.0-1.fc8 installed R-DBI.noarch 0.2-1.fc8 installed R-DynDoc.noarch 1.17.0-1.fc8 installed R-GO.noarch 2.0.1-1.fc8 installed R-KEGG.noarch 2.0.1-1.fc8 installed R-R2HTML.noarch 1.58-1.fc8 installed R-RColorBrewer.noarch 1.0-1.fc8 installed R-RSQLite.x86_64 0.5-1.fc8 installed R-RScaLAPACK.x86_64 0.5.1-10.fc8.1 installed R-RUnit.noarch 0.4.17-1.fc8 installed R-Rgraphviz.x86_64 1.17.7-1.fc8 installed R-SparseM.x86_64 0.74-1.fc8 installed R-XML.x86_64 1.9-1.fc8 installed R-abind.noarch 1.1-1.fc8 installed R-acepack.x86_64 1.3-2.fc8.1 installed R-affy.x86_64 1.17.2-2.fc8 installed R-affyPLM.x86_64 1.15.0-1.fc8 installed R-affyQCReport.noarch 1.17.0-1.fc8 installed R-affydata.noarch 1.11.2-1.fc8 installed R-affyio.x86_64 1.7.2-1.fc8 installed R-annaffy.noarch 1.11.0-1.fc8 installed R-annotate.noarch 1.17.1-3.fc8 installed R-devel.x86_64 2.6.1-1.fc8 installed R-fibroEset.noarch 1.4.2-1.fc8 installed R-gcrma.x86_64 2.11.0-1.fc8 installed R-genefilter.x86_64 1.17.2-1.fc8 installed R-geneplotter.noarch 1.17.0-1.fc8 installed R-graph.x86_64 1.17.10-1.fc8 installed R-hdf5.x86_64 1.6.6-2.fc8 installed R-hgu133a.noarch 1.16.0-1.fc8 installed R-hgu133acdf.noarch 1.16.0-1.fc8 installed R-hgu95aprobe.noarch 1.16.4-1.fc8 installed R-hgu95av2.noarch 1.16.0-1.fc8 installed R-hgu95av2.db.noarch 2.0.2-1.fc8 installed R-hgu95av2cdf.noarch 1.16.0-1.fc8 installed R-hgu95av2probe.noarch 1.16.3-2.fc8 installed R-hsahomology.noarch 1.16.0-1.fc8 installed R-hu6800.noarch 1.16.0-1.fc8 installed R-hu6800cdf.noarch 1.16.0-1.fc8 installed R-hu6800probe.noarch 1.16.2-1.fc8 installed R-limma.noarch 2.13.1-1.fc8 installed R-mAr.x86_64 1.1-11.fc8 installed R-maanova.x86_64 1.4.0-3.fc8 installed R-matchprobes.x86_64 1.11.0-1.fc8 installed R-multcomp.noarch 0.992-3.fc8 installed R-multtest.x86_64 1.19.0-1.fc8 installed R-mvtnorm.x86_64 0.8-3.fc8 installed R-pls.noarch 2.0-4.fc8 installed R-preprocessCore.x86_64 1.1.0-2.fc8 installed R-preprocessCore-devel.x86_64 1.1.0-2.fc8 installed R-qvalue.noarch 1.13.0-1.fc8 installed R-rae230a.noarch 1.16.0-2.fc8 installed R-rae230aprobe.noarch 1.16.2-2.fc8 installed R-randomForest.x86_64 4.5-1.fc8 installed R-rlecuyer.x86_64 0.1-3.fc8 installed R-siggenes.noarch 1.13.0-1.fc8 installed R-simpleaffy.x86_64 2.15.02-1.fc8 installed R-simpleaffy-devel.x86_64 2.15.02-1.fc8 installed R-systemfit.noarch 0.8-6.fc8 installed R-tkWidgets.noarch 1.16.0-1.fc8 installed R-vsn.x86_64 3.3.6-1.fc8 installed R-waveslim.x86_64 1.6-4.fc8 installed R-wavethresh.x86_64 2.2-7.fc8 installed R-widgetTools.noarch 1.15.0-1.fc8 installed R-xlahomology.noarch 1.16.0-1.fc8 installed R-xtable.noarch 1.5-1.fc8 installed

	

	
		
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