Author: alexlan
Update of /cvs/extras/rpms/perl-bioperl-run/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv7983
Modified Files:
.cvsignore perl-bioperl-run.spec sources
Log Message:
- Update to release candidate 1 for 1.6.0
- Remove examples subdirectory, no longer distributed
- Deprecated modules no longer need removing
- Add BR: perl(IPC::Run)
Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl-run/devel/.cvsignore,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- .cvsignore 19 Apr 2007 21:50:37 -0000 1.2
+++ .cvsignore 3 Feb 2009 14:15:11 -0000 1.3
@@ -1 +0,0 @@
-bioperl-run-1.5.2_100.tar.bz2
Index: perl-bioperl-run.spec
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl-run/devel/perl-bioperl-run.spec,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- perl-bioperl-run.spec 4 Mar 2008 05:40:28 -0000 1.2
+++ perl-bioperl-run.spec 3 Feb 2009 14:15:11 -0000 1.3
@@ -1,18 +1,19 @@
Name: perl-bioperl-run
-Version: 1.5.2_100
-Release: 3%{?dist}
+Version: 1.5.9
+Release: 0.1.1%{?dist}
Summary: Modules to provide a Perl interface to various bioinformatics applications
Group: Development/Libraries
License: GPL+ or Artistic
URL: http://bioperl.org
-Source0: http://bioperl.org/DIST/bioperl-run-%{version}.tar.bz2
+Source0: http://bioperl.org/DIST/BioPerl-run-%{version}_1.tar.bz2
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
BuildArch: noarch
-BuildRequires: perl(Bio::Root::Version) >= 1.5.2
+BuildRequires: perl(Bio::Root::Version) >= 1.5.9
BuildRequires: perl(Algorithm::Diff) >= 1
BuildRequires: perl(XML::Parser::PerlSAX)
+BuildRequires: perl(IPC::Run)
BuildRequires: perl(HTML::Parser)
BuildRequires: perl(Module::Build)
Requires: perl(:MODULE_COMPAT_%(eval "`%{__perl} -V:version`"; echo $version))
@@ -23,19 +24,13 @@
used with common Bioperl objects.
%prep
-%setup -q -n bioperl-run-%{version}
+%setup -q -n BioPerl-run-%{version}._1
# remove all execute bits from the doc stuff
-find examples -type f -exec chmod -x {} 2>/dev/null ';'
chmod -x INSTALL INSTALL.PROGRAMS
-# remove deprecated modules (reported upstream and will be removed in
-# _101 tarball)
-rm Bio/Tools/Run/Phylo/Forester/SDI.pm Bio/Tools/Run/JavaRunner.pm Bio/Tools/Run/AbstractRunner.pm
-
%build
%{__perl} Build.PL --installdirs vendor << EOF
-n
a
EOF
@@ -62,7 +57,6 @@
%files
%defattr(-,root,root,-)
## don't distribute "doc" "scripts" subdirectories, they don't contain docs
-%doc examples
%doc AUTHORS Changes INSTALL INSTALL.PROGRAMS README
%{perl_vendorlib}/*
%{_mandir}/man3/*.3*
@@ -70,6 +64,12 @@
%{_mandir}/man1/*.1*
%changelog
+* Tue Feb 3 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.5.9-0.1.1
+- Update to release candidate 1 for 1.6.0
+- Remove examples subdirectory, no longer distributed
+- Deprecated modules no longer need removing
+- Add BR: perl(IPC::Run)
+
* Tue Mar 4 2008 Tom "spot" Callaway <tcallawa@xxxxxxxxxx> 1.5.2_100-3
- rebuild for new perl
Index: sources
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl-run/devel/sources,v
retrieving revision 1.2
retrieving revision 1.3
diff -u -r1.2 -r1.3
--- sources 19 Apr 2007 21:50:37 -0000 1.2
+++ sources 3 Feb 2009 14:15:11 -0000 1.3
@@ -1 +0,0 @@
-cc44c719820608f92139f4a81d472ea6 bioperl-run-1.5.2_100.tar.bz2
--
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