Author: alexlan
Update of /cvs/extras/rpms/perl-bioperl/devel
In directory cvs1.fedora.phx.redhat.com:/tmp/cvs-serv20818
Modified Files:
.cvsignore perl-bioperl.spec sources
Log Message:
* Sun Jan 18 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.5.9-0.4.3
- Update to 1.6.0 release candidate 3
Index: .cvsignore
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/devel/.cvsignore,v
retrieving revision 1.5
retrieving revision 1.6
diff -u -r1.5 -r1.6
--- .cvsignore 8 Jan 2009 06:48:43 -0000 1.5
+++ .cvsignore 18 Jan 2009 08:52:02 -0000 1.6
@@ -1 +1 @@
-BioPerl-1.5.9_2.tar.bz2
+BioPerl-1.5.9_3.tar.bz2
Index: perl-bioperl.spec
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/devel/perl-bioperl.spec,v
retrieving revision 1.17
retrieving revision 1.18
diff -u -r1.17 -r1.18
--- perl-bioperl.spec 8 Jan 2009 06:48:43 -0000 1.17
+++ perl-bioperl.spec 18 Jan 2009 08:52:03 -0000 1.18
@@ -1,12 +1,12 @@
Name: perl-bioperl
Version: 1.5.9
-Release: 0.3.2%{?dist}
+Release: 0.4.3%{?dist}
Summary: Perl tools for computational molecular biology
Group: Development/Libraries
License: GPL+ or Artistic
URL: http://www.bioperl.org/
-Source0: http://bioperl.org/DIST/BioPerl-%{version}_2.tar.bz2
+Source0: http://bioperl.org/DIST/BioPerl-%{version}_3.tar.bz2
Patch0: bioperl-1.5.9-paths.patch
BuildRoot: %{_tmppath}/%{name}-%{version}-%{release}-root-%(%{__id_u} -n)
@@ -58,7 +58,7 @@
many modules depend on each other to achieve a task.
%prep
-%setup -q -n BioPerl-%{version}._2
+%setup -q -n BioPerl-%{version}._3
%patch0 -p1
# temporarily remove PhyloNetwork before compiling until upstream says
@@ -70,13 +70,13 @@
# these are the unwanted Requires for perl-bioperl-run, keeping in
# case we need to do the temporary hack for bootstrapping again
-#cat << \EOF > %{_builddir}/BioPerl-%{version}._2/%{name}-req
+#cat << \EOF > %{_builddir}/BioPerl-%{version}._3/%{name}-req
##!/bin/sh
#%{__perl_requires} $* |\
# sed -e '/perl(Bio::Tools::Run::Alignment::Clustalw)/d; /perl(Bio::Tools::Run::GenericParameters)/d; /perl(Bio::Tools::Run::Phylo::Molphy::ProtML)/d; /perl(Bio::Tools::Run::Phylo::Phylip::Neighbor)/d; /perl(Bio::Tools::Run::Phylo::Phylip::ProtDist)/d; /perl(Bio::Tools::Run::Phylo::Phylip::ProtPars)/d; /perl(Bio::Tools::Run::RemoteBlast)/d'
#EOF
-#%%define __perl_requires %{_builddir}/BioPerl-%{version}._2/%{name}-req
+#%%define __perl_requires %{_builddir}/BioPerl-%{version}._3/%{name}-req
#chmod +x %{__perl_requires}
# remove all execute bits from the doc stuff
@@ -129,6 +129,9 @@
%{_mandir}/man3/*.3*
%changelog
+* Sun Jan 18 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.5.9-0.4.3
+- Update to 1.6.0 release candidate 3
+
* Wed Jan 7 2009 Alex Lancaster <alexlan[AT]fedoraproject org> - 1.5.9-0.3.2
- Update to 1.6.0 release candidate 2
- Remove filter for Bio::Graphics*, upstream removed them from the
Index: sources
===================================================================
RCS file: /cvs/extras/rpms/perl-bioperl/devel/sources,v
retrieving revision 1.6
retrieving revision 1.7
diff -u -r1.6 -r1.7
--- sources 8 Jan 2009 06:48:43 -0000 1.6
+++ sources 18 Jan 2009 08:52:03 -0000 1.7
@@ -1 +1 @@
-e01ce300592c8a5f7f1f1d2eba5405bc BioPerl-1.5.9_2.tar.bz2
+d4cf25074d40c6797e7eeff8c925b5d6 BioPerl-1.5.9_3.tar.bz2
--
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