Re: hdf5 dependency

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11.1.2017, 13.24, Steve Berg kirjoitti:
Not sure if this is the right place to ask but here goes...

I've got a collection of SciLinux 7.2 systems at work that all need the hdf5 packages and lately updating those packages has been failing.

Error: Package: hdf5-openmpi-1.8.12-8.el7.x86_64 (epel)
           Requires: libmpi_usempi.so.5()(64bit)

Normally my systems update from a locally rsync'd mirror, but I've tried using the regular repos/mirrors and still see the error.  Tried using "yum whatprovides */libmpi_usempi.so.5" and that didn't find any package to provide the dependency.

How do I get the hdf5 packages updated if a dependency isn't available?

On a CentOS 7.3.1611 system:

# yum provides 'libmpi_usempi.so.5()(64bit)'
...
openmpi-1.10.3-3.el7.x86_64 : Open Message Passing Interface
Repo        : base
Matched from:
Provides    : libmpi_usempi.so.5()(64bit)

openmpi-1.10.0-10.el7.x86_64.rpm in 7.2 provides only libmpi_usempi.so.1()(64bit), so you will need to upgrade to 7.3 to use hdf5-openmpi-1.8.12-8.el7.x86_64 from EPEL.
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